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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RAB5A ENSG00000144566

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Description

RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783]

Gene Synonyms

RAB5

Location

Chromosome 3: 19,988,571-20,026,667 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 8 transcripts (splice variants), 281 orthologues and 68 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273047.4	RAB5A-001	2536	215aa	ENSP00000273047.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2633	P20339	NM_004162.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422242.1	RAB5A-003	1443	201aa	ENSP00000411941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJA5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000443878.1	RAB5A-005	753	15aa	ENSP00000398450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446547.1	RAB5A-002	1358	65aa	ENSP00000396632.1	Nonsense mediated decay		F8WD79	-	-
ENST00000412966.1	RAB5A-008	622	62aa	ENSP00000403533.1	Nonsense mediated decay		F8WCY6	-	-
ENST00000469122.1	RAB5A-011	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473608.1	RAB5A-010	868	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476544.1	RAB5A-007	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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