Description
tropomyosin 3 [Source:HGNC Symbol;Acc:12012]
Gene Synonyms
CAPM1, CFTD, NEM1, OK/SW-cl.5, TM-5, TM3, TM30, TM30nm, TM5, TPMsk3, TRK, hscp30
Location
Chromosome 1: 154,127,784-154,167,124 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 22 transcripts (splice variants), 3 paralogues and is associated with 82 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000368533.3 | TPM3-004 | 3131 | 248aa | ENSP00000357521.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1060 | P06753 Q6LDX7 Q8NI98 | NM_153649.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000330188.9 | TPM3-009 | 2108 | 248aa | ENSP00000339035.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41400 | P06753 Q5VU63 | NM_001043353.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000341485.5 | TPM3-003 | 2063 | 232aa | ENSP00000341653.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5HYB6 Q6LDX7 Q8NI98 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000341372.3 | TPM3-005 | 2007 | 223aa | ENSP00000339378.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DWT5 Q5VU61 Q6LDX7 Q8NI98 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000328159.4 | TPM3-006 | 1771 | 248aa | ENSP00000357520.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS60275 | Q5VU58 Q6LDX7 Q8TCG3 | NM_001278189.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000368530.2 | TPM3-001 | 1523 | 285aa | ENSP00000357516.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41403 | D6RGJ6 P06753 Q5VU62 | NM_152263.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000271850.7 | TPM3-015 | 1219 | 285aa | ENSP00000271850.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RGJ6 J3KN67 Q6LDX7 Q8NI98 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000368531.2 | TPM3-026 | 1115 | 247aa | ENSP00000357517.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41402 | P06753 Q6LDX7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000323144.7 | TPM3-010 | 1088 | 247aa | ENSP00000357518.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41401 | P06753 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000302206.5 | TPM3-011 | 741 | 158aa | ENSP00000307712.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS60274 | Q5VU63 | NM_001278191.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000515609.1 | TPM3-018 | 587 | 75aa | ENSP00000426306.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RGJ6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000509409.1 | TPM3-016 | 1248 | 49aa | ENSP00000426521.1 | Nonsense mediated decay | D6RFM2 | - | - | |
| ENST00000509601.1 | TPM3-020 | 543 | 95aa | ENSP00000422207.1 | Nonsense mediated decay | D6R904 | - | - | |
| ENST00000469717.1 | TPM3-008 | 4041 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000312970.8 | TPM3-022 | 750 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000368527.3 | TPM3-019 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000466010.1 | TPM3-013 | 461 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000368545.3 | TPM3-014 | 2147 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504663.1 | TPM3-025 | 870 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473036.2 | TPM3-021 | 746 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505010.1 | TPM3-023 | 540 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000513769.1 | TPM3-024 | 539 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
