Description
peroxisomal biogenesis factor 5 [Source:HGNC Symbol;Acc:9719]
Gene Synonyms
PBD2A, PBD2B, PTS1-BP, PTS1R, PXR1
Location
Chromosome 12: 7,341,281-7,371,170 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 20 transcripts (splice variants), 1 paralogue and is associated with 7 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000266563.5 | PEX5-002 | 3252 | 602aa | ENSP00000266563.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44824 | B4DWW0 F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H432 P50542 | NM_001131024.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000266564.3 | PEX5-006 | 3170 | 631aa | ENSP00000266564.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8576 | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 P50542 | NM_000319.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000455147.2 | PEX5-001 | 2689 | 639aa | ENSP00000400647.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44823 | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 P50542 | NM_001131026.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000420616.2 | PEX5-004 | 2477 | 639aa | ENSP00000410159.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44823 | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 P50542 | NM_001131025.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000434354.2 | PEX5-003 | 2253 | 654aa | ENSP00000407401.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44822 | F5GYB4 F5GZ41 F5H0L9 P50542 | NM_001131023.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000412720.2 | PEX5-005 | 2105 | 660aa | ENSP00000391601.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E0T2 F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000396637.3 | PEX5-013 | 1508 | 410aa | ENSP00000379877.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYB4 F5GZ41 F5H0L9 J3KPV0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545574.1 | PEX5-012 | 878 | 272aa | ENSP00000443500.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYB4 F5GZ41 F5H0L9 F5H5C0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542539.1 | PEX5-008 | 848 | 248aa | ENSP00000439025.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540398.1 | PEX5-009 | 641 | 102aa | ENSP00000438494.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000544456.1 | PEX5-011 | 579 | 104aa | ENSP00000440833.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536883.1 | PEX5-007 | 575 | 115aa | ENSP00000441553.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ41 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536841.1 | PEX5-014 | 567 | 114aa | ENSP00000445630.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5H205 F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545845.1 | PEX5-016 | 562 | 128aa | ENSP00000440711.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYB4 F5GZ41 F5H0L9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543974.1 | PEX5-010 | 548 | 118aa | ENSP00000438772.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ41 F5H0L9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000537873.1 | PEX5-015 | 522 | 168aa | ENSP00000437938.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5H205 F5H432 F5H637 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541850.1 | PEX5-020 | 386 | 31aa | ENSP00000444787.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000545220.1 | PEX5-017 | 553 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000539304.1 | PEX5-018 | 708 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000535486.2 | PEX5-019 | 560 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
