Description
integrin, beta 4 [Source:HGNC Symbol;Acc:6158]
Gene Synonyms
CD104
Location
Chromosome 17: 73,717,408-73,753,899 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 14 transcripts (splice variants), 9 paralogues and is associated with 7 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000200181.3 | ITGB4-001 | 5919 | 1822aa | ENSP00000200181.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11727 | P16144 | NM_000213.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000339591.3 | ITGB4-201 | 5867 | 1805aa | ENSP00000344079.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32736 | P16144 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000449880.2 | ITGB4-003 | 5689 | 1805aa | ENSP00000400217.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32736 | P16144 | NM_001005619.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000450894.3 | ITGB4-002 | 5645 | 1752aa | ENSP00000405536.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58599 | J3QS11 P16144 | NM_001005731.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000579662.1 | ITGB4-007 | 5554 | 1752aa | ENSP00000463651.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58599 | J3QS11 P16144 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000583327.1 | ITGB4-011 | 699 | 216aa | ENSP00000464473.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QS11 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000578318.1 | ITGB4-014 | 688 | 63aa | ENSP00000462494.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000584939.1 | ITGB4-012 | 603 | 201aa | ENSP00000464259.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000582629.1 | ITGB4-008 | 458 | 114aa | ENSP00000463788.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QQL2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000584558.1 | ITGB4-005 | 2895 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000584374.1 | ITGB4-009 | 950 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000580542.1 | ITGB4-004 | 2798 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000584025.1 | ITGB4-010 | 804 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000579211.1 | ITGB4-013 | 411 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
