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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: POU6F2 ENSG00000106536

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Description

POU class 6 homeobox 2 [Source:HGNC Symbol;Acc:21694]

Gene Synonyms

RPF-1, RPF1, WT5, WTSL

Location

Chromosome 7: 39,017,598-39,532,694 forward strand.

GRCh37:CM000669.1

About this gene

This gene has 10 transcripts (splice variants), 15 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403058.1	POU6F2-002	2335	691aa	ENSP00000384004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34620	H0YL15 P78424	NM_007252.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000518318.2	POU6F2-001	5925	655aa	ENSP00000430514.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55103	H0YL15 P78424	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000559001.1	POU6F2-012	2407	636aa	ENSP00000452633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK27 H0YKR5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524147.1	POU6F2-006	1485	412aa	ENSP00000452911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKR5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520104.1	POU6F2-007	1290	403aa	ENSP00000453020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YL15	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451021.1	POU6F2-003	570	144aa	ENSP00000409684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464276.2	POU6F2-004	530	62aa	ENSP00000475747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQC3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416452.1	POU6F2-005	1028	142aa	ENSP00000404868.1	Nonsense mediated decay		H7C2B2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000517348.1	POU6F2-008	1578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000426456.1	POU6F2-009	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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