Description
LIM domain only 3 (rhombotin-like 2) [Source:HGNC Symbol;Acc:6643]
Gene Synonyms
DAT1, RBTN3, RBTNL2, RHOM3, Rhom-3
Location
Chromosome 12: 16,701,307-16,763,528 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 34 transcripts (splice variants) and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000320122.6 | LMO3-014 | 3759 | 145aa | ENSP00000312856.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | NM_001243611.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000261169.6 | LMO3-201 | 3526 | 156aa | ENSP00000261169.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58211 | B4DGL5 F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000441439.2 | LMO3-003 | 3515 | 145aa | ENSP00000412479.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | NM_018640.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000354662.1 | LMO3-202 | 3450 | 145aa | ENSP00000346689.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | NM_001001395.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000447609.1 | LMO3-010 | 3365 | 145aa | ENSP00000413703.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | NM_001243610.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000537304.1 | LMO3-011 | 1685 | 145aa | ENSP00000440099.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000540848.1 | LMO3-001 | 1574 | 145aa | ENSP00000445751.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000535535.1 | LMO3-013 | 1488 | 145aa | ENSP00000446115.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | NM_001243612.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000534946.1 | LMO3-020 | 1016 | 145aa | ENSP00000439275.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541295.1 | LMO3-203 | 983 | 163aa | ENSP00000446463.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58212 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000540445.1 | LMO3-007 | 906 | 167aa | ENSP00000442786.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58210 | Q8TAP4 | NM_001243613.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000538020.1 | LMO3-030 | 622 | 58aa | ENSP00000446095.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4K9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546279.1 | LMO3-021 | 590 | 110aa | ENSP00000441360.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYZ6 F5GZR3 F5H2N9 F5H4K9 F5H4T0 F6TDU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538051.1 | LMO3-022 | 579 | 97aa | ENSP00000445504.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZR3 F5H2N9 F5H4K9 F5H4T0 F6TDU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541846.1 | LMO3-016 | 573 | 145aa | ENSP00000444393.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8678 | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 Q8TAP4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000540590.1 | LMO3-019 | 565 | 84aa | ENSP00000439989.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4K9 F5H4T0 F6TDU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539534.1 | LMO3-031 | 543 | 118aa | ENSP00000443807.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545436.1 | LMO3-029 | 530 | 88aa | ENSP00000444269.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZR3 F5H4K9 F5H4T0 F6TDU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000537757.1 | LMO3-024 | 516 | 118aa | ENSP00000445193.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546281.1 | LMO3-025 | 496 | 118aa | ENSP00000442713.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYZ6 F5GZR3 F5H2N9 F5H3S4 F5H4K9 F5H4T0 F6TDU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000396205.2 | LMO3-004 | 3534 | 69aa | ENSP00000379508.2 | Nonsense mediated decay | F5H4K9 F6TDU8 | - | - | |
| ENST00000453727.2 | LMO3-012 | 2403 | 60aa | ENSP00000404386.2 | Nonsense mediated decay | Q05D86 | - | - | |
| ENST00000541589.1 | LMO3-006 | 1499 | 60aa | ENSP00000440948.1 | Nonsense mediated decay | Q05D86 | - | - | |
| ENST00000541764.1 | LMO3-009 | 1489 | 92aa | ENSP00000437890.1 | Nonsense mediated decay | C9JE61 F5H4K9 F5H655 | - | - | |
| ENST00000424192.2 | LMO3-002 | 983 | 70aa | ENSP00000404656.2 | Nonsense mediated decay | C9JE61 F5H4K9 | - | - | |
| ENST00000536172.1 | LMO3-027 | 587 | 60aa | ENSP00000440885.1 | Nonsense mediated decay | Q05D86 | - | - | |
| ENST00000539232.1 | LMO3-028 | 580 | 60aa | ENSP00000438187.1 | Nonsense mediated decay | Q05D86 | - | - | |
| ENST00000544754.1 | LMO3-005 | 555 | 69aa | ENSP00000439900.1 | Nonsense mediated decay | F5H4K9 F6TDU8 | - | - | |
| ENST00000537568.1 | LMO3-018 | 594 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536509.1 | LMO3-023 | 550 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000332914.6 | LMO3-017 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000544276.1 | LMO3-026 | 460 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543721.1 | LMO3-008 | 3626 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000439600.2 | LMO3-015 | 1044 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
