Gene: LAMP2 ENSG00000005893

Description

lysosomal-associated membrane protein 2 [Source:HGNC Symbol;Acc:6501]

Gene Synonyms

CD107b, LAMP-2, LAMPB, LGP110

Location

Chromosome X: 119,561,682-119,603,220 reverse strand.

GRCh37:CM000685.1

About this gene

This gene has 6 transcripts (splice variants), 3 paralogues and is associated with 5 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434600.2	LAMP2-004	2089	411aa	ENSP00000408411.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48159	P13473	NM_002294.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371335.4	LAMP2-002	4030	410aa	ENSP00000360386.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14600	B4E2S7 P13473	NM_013995.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000200639.4	LAMP2-001	1867	410aa	ENSP00000200639.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14599	P13473	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540603.1	LAMP2-202	1625	363aa	ENSP00000440479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2S7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538785.1	LAMP2-201	1433	300aa	ENSP00000440506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2R9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000486593.1	LAMP2-003	1069	258aa	ENSP00000431526.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Gene: LAMP2 ENSG00000005893

Summary