Description
collagen, type IV, alpha 6 [Source:HGNC Symbol;Acc:2208]
Gene Synonyms
CXDELq22.3, DELXq22.3
Location
Chromosome X: 107,386,780-107,682,727 reverse strand.
GRCh37:CM000685.1
About this gene
This gene has 10 transcripts (splice variants), 17 paralogues and is associated with 2 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000334504.7 | COL4A6-002 | 6700 | 1690aa | ENSP00000334733.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14542 | B4DU54 Q14031 | NM_033641.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000394872.2 | COL4A6-201 | 6700 | 1691aa | ENSP00000378340.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8MXH5 B4DU54 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000372216.4 | COL4A6-001 | 6570 | 1691aa | ENSP00000361290.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14541 | B4DU54 Q14031 | NM_001847.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000545689.1 | COL4A6-204 | 6086 | 1666aa | ENSP00000443707.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DU54 F5H851 | NM_001287759.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000538570.1 | COL4A6-203 | 5987 | 1633aa | ENSP00000445236.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DU54 F5H3Q5 | NM_001287760.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000418180.1 | COL4A6-202 | 1031 | 260aa | ENSP00000406002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DZ39 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000461897.1 | COL4A6-004 | 1889 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000477085.1 | COL4A6-003 | 1784 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000487645.1 | COL4A6-006 | 812 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000468338.1 | COL4A6-005 | 865 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |