Description
collagen, type I, alpha 1 [Source:HGNC Symbol;Acc:2197]
Gene Synonyms
OI4
Location
Chromosome 17: 48,260,650-48,278,993 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 13 transcripts (splice variants), 17 paralogues and is associated with 93 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000225964.5 | COL1A1-001 | 6727 | 1464aa | ENSP00000225964.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11561 | P02452 Q6LAN8 Q9UMA6 | NM_000088.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000507689.1 | COL1A1-013 | 549 | 154aa | ENSP00000460459.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L3H7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000471344.1 | COL1A1-006 | 1192 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000510710.3 | COL1A1-018 | 1147 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000486572.1 | COL1A1-009 | 836 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000511732.1 | COL1A1-016 | 789 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000474644.1 | COL1A1-002 | 640 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000463440.1 | COL1A1-005 | 614 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000476387.1 | COL1A1-007 | 600 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000495677.1 | COL1A1-003 | 594 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000504289.1 | COL1A1-014 | 481 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000485870.1 | COL1A1-004 | 403 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000494334.1 | COL1A1-008 | 396 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |