Description
coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:26090]
Gene Synonyms
CILD15, FAP172, FLJ20753, FLJ32021, KIAA1640
Location
Chromosome 17: 78,010,435-78,074,412 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 16 transcripts (splice variants) and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000397545.4 | CCDC40-001 | 4294 | 1142aa | ENSP00000380679.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42395 | I3L292 I3L2X6 Q4G0X9 | NM_017950.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374877.3 | CCDC40-201 | 3120 | 1030aa | ENSP00000364011.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58604 | I3L292 I3L2X6 J3QSY2 | NM_001243342.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374876.4 | CCDC40-003 | 2010 | 478aa | ENSP00000364010.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 I3L2X6 Q4G0X9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000269318.5 | CCDC40-002 | 1970 | 579aa | ENSP00000269318.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 I3L2X6 Q4G0X9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000571028.1 | CCDC40-012 | 593 | 83aa | ENSP00000461034.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000574099.1 | CCDC40-007 | 537 | 126aa | ENSP00000460002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 I3L2X6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576033.1 | CCDC40-009 | 466 | 99aa | ENSP00000459489.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573474.1 | CCDC40-011 | 554 | 85aa | ENSP00000460432.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000573903.1 | CCDC40-014 | 561 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000572270.1 | CCDC40-008 | 460 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000572253.1 | CCDC40-005 | 3962 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574799.1 | CCDC40-004 | 3795 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572083.1 | CCDC40-010 | 816 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576241.1 | CCDC40-015 | 714 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000575431.1 | CCDC40-013 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574933.1 | CCDC40-016 | 326 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
