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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC39 ENSG00000145075

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Description

coiled-coil domain containing 39 [Source:HGNC Symbol;Acc:25244]

Gene Synonyms

CILD14, DKFZp434A128, FAP59

Location

Chromosome 3: 180,320,646-180,588,793 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 8 transcripts (splice variants) and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273654.4	CCDC39-201	4450	755aa	ENSP00000273654.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WBW2 Q9UFE4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442201.2	CCDC39-001	3279	941aa	ENSP00000405708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46964	Q9UFE4	NM_181426.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471307.2	CCDC39-003	783	97aa	ENSP00000418702.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489868.1	CCDC39-007	534	67aa	ENSP00000420025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5I6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000473854.1	CCDC39-006	487	102aa	ENSP00000418482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000476379.1	CCDC39-002	4451	671aa	ENSP00000417960.1	Nonsense mediated decay		F8WBW2	-	-
ENST00000485055.1	CCDC39-004	2874	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495817.1	CCDC39-005	1047	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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