Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HEXDC ENSG00000169660

.

Description

hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:HGNC Symbol;Acc:26307]

Gene Synonyms

FLJ23825

Location

Chromosome 17: 80,376,194-80,400,521 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337014.6	HEXDC-001	2285	585aa	ENSP00000337854.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42402	J3KT84 J3QLN1 Q8WVB3	NM_173620.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577944.1	HEXDC-002	1820	544aa	ENSP00000463129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KT84 J3QKL0 J3QLN1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327949.9	HEXDC-003	1733	486aa	ENSP00000332634.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KT84 J3QLN1 Q8WVB3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578130.1	HEXDC-012	853	214aa	ENSP00000462000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRH3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580235.1	HEXDC-007	638	117aa	ENSP00000462856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KT84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000578632.1	HEXDC-010	582	78aa	ENSP00000463625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582429.1	HEXDC-004	1824	361aa	ENSP00000464912.1	Nonsense mediated decay		B7Z2X3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582315.1	HEXDC-008	873	47aa	ENSP00000462923.1	Nonsense mediated decay		J3KTD0	-	-
ENST00000578616.1	HEXDC-013	862	88aa	ENSP00000463241.1	Nonsense mediated decay		J3QKU6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578775.1	HEXDC-011	779	76aa	ENSP00000462303.2	Nonsense mediated decay		J3KS46	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583354.1	HEXDC-014	686	80aa	ENSP00000465465.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000581482.1	HEXDC-009	553	46aa	ENSP00000464497.1	Nonsense mediated decay		J3QS29	-	-
ENST00000585077.1	HEXDC-005	1139	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582131.1	HEXDC-015	942	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583978.1	HEXDC-006	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.