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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LETM2 ENSG00000165046

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Description

leucine zipper-EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:14648]

Gene Synonyms

FLJ25409

Location

Chromosome 8: 38,243,725-38,267,045 forward strand.

GRCh37:CM000670.1

About this gene

This gene has 15 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000519476.2	LETM2-002	2240	173aa	ENSP00000429269.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8K1M9 E9PIC7 E9PN52	NM_001286821.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379957.4	LETM2-013	1873	491aa	ENSP00000369291.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69466	E9PIC7 E9PN52 Q2VYF4	NM_001286819.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523983.2	LETM2-003	1776	444aa	ENSP00000428765.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56534	Q2VYF4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297720.5	LETM2-001	1693	396aa	ENSP00000297720.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6106	Q2VYF4	NM_144652.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524874.1	LETM2-015	1459	443aa	ENSP00000431211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIC7 E9PMA4 E9PN52	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527710.1	LETM2-007	1261	277aa	ENSP00000434867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q2VYF4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527334.1	LETM2-012	557	116aa	ENSP00000432080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526356.1	LETM2-014	554	142aa	ENSP00000432955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIC7 E9PN52	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527175.1	LETM2-009	529	86aa	ENSP00000432607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523268.2	LETM2-004	2745	169aa	ENSP00000428944.2	Nonsense mediated decay		E5RJN4 E5RK40 E9PIC7 E9PN52	-	-
ENST00000518883.2	LETM2-005	2250	122aa	ENSP00000429019.2	Nonsense mediated decay		E5RJN4	-	-
ENST00000528827.1	LETM2-011	487	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518121.1	LETM2-006	1447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526075.1	LETM2-008	986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530448.1	LETM2-010	650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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