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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EBF1 ENSG00000164330

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Description

early B-cell factor 1 [Source:HGNC Symbol;Acc:3126]

Gene Synonyms

COE1, EBF, O/E-1, OLF1

Location

Chromosome 5: 158,122,928-158,526,769 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 10 transcripts (splice variants), 3 paralogues and is associated with 84 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313708.6	EBF1-001	5250	591aa	ENSP00000322898.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4343	Q9UH73	NM_024007.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380654.4	EBF1-002	2345	560aa	ENSP00000370029.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UH73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517373.1	EBF1-006	2277	523aa	ENSP00000428020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFQ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518836.1	EBF1-010	5127	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523464.1	EBF1-008	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518323.1	EBF1-007	602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523315.1	EBF1-004	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519739.1	EBF1-009	4735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519890.1	EBF1-005	4695	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522192.1	EBF1-003	1911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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