Description
U2 small nuclear RNA auxiliary factor 1 [Source:HGNC Symbol;Acc:12453]
Gene Synonyms
FP793, RN, RNU2AF1, U2AF35, U2AFBP
Location
Chromosome 21: 44,513,066-44,527,697 reverse strand.
GRCh37:CM000683.1
About this gene
This gene has 12 transcripts (splice variants), 4 paralogues and is associated with 82 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000459639.1 | U2AF1-004 | 1675 | 167aa | ENSP00000418705.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42948 | Q01081 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000398137.1 | U2AF1-201 | 1019 | 167aa | ENSP00000381205.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42948 | Q01081 | NM_001025204.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000291552.4 | U2AF1-001 | 962 | 240aa | ENSP00000291552.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13694 | Q01081 | NM_006758.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000380276.2 | U2AF1-002 | 940 | 240aa | ENSP00000369629.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33574 | Q01081 Q69YM7 | NM_001025203.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000464750.1 | U2AF1-003 | 966 | 75aa | ENSP00000420672.1 | Nonsense mediated decay | Q01081 | - | - | |
| ENST00000486519.1 | U2AF1-010 | 682 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000475639.1 | U2AF1-005 | 4694 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496462.1 | U2AF1-006 | 3973 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000478282.1 | U2AF1-007 | 3344 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471250.1 | U2AF1-008 | 1676 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468039.1 | U2AF1-011 | 609 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000463599.1 | U2AF1-009 | 338 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
