Description
Rap guanine nucleotide exchange factor (GEF) 6 [Source:HGNC Symbol;Acc:20655]
Gene Synonyms
KIA001LB, PDZ-GEF2, PDZGEF2, RA-GEF-2, RAGEF2
Location
Chromosome 5: 130,759,614-130,970,929 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 15 transcripts (splice variants) and 9 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000296859.6 | RAPGEF6-006 | 5618 | 1609aa | ENSP00000296859.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54900 | D6RB02 Q8TEU7 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509018.1 | RAPGEF6-001 | 8357 | 1601aa | ENSP00000421684.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34225 | D6RB02 Q8TEU7 | NM_016340.5 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000307984.5 | RAPGEF6-201 | 8079 | 1509aa | ENSP00000309298.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54901 | D6RB02 Q8TEU7 | NM_001164387.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000507093.1 | RAPGEF6-003 | 5727 | 1504aa | ENSP00000426081.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54899 | D6RB02 Q8TEU7 | NM_001164388.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000308008.6 | RAPGEF6-004 | 4176 | 1391aa | ENSP00000311419.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54898 | D6RB02 Q8TEU7 | NM_001164389.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000512052.1 | RAPGEF6-005 | 3535 | 1114aa | ENSP00000426910.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE77 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000510071.1 | RAPGEF6-008 | 3107 | 827aa | ENSP00000425389.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54897 | D6RB02 Q8TEU7 | NM_001164390.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000513227.1 | RAPGEF6-012 | 560 | 155aa | ENSP00000424574.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RB02 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504575.1 | RAPGEF6-013 | 552 | 155aa | ENSP00000425891.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RD23 D6RIH0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504039.1 | RAPGEF6-014 | 542 | 149aa | ENSP00000427102.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RD23 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000515170.1 | RAPGEF6-002 | 4103 | 1204aa | ENSP00000425772.1 | Nonsense mediated decay | B7Z7Y1 D6RB02 | - | - | |
| ENST00000503398.2 | RAPGEF6-010 | 149 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000512611.1 | RAPGEF6-007 | 3683 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000514179.1 | RAPGEF6-009 | 2200 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504919.1 | RAPGEF6-011 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
