Gene: PRDM16 ENSG00000142611

Description

PR domain containing 16 [Source:HGNC Symbol;Acc:14000]

Gene Synonyms

CMD1LL, KIAA1675, LVNC8, MEL1, MGC166915, PFM13

Location

Chromosome 1: 2,985,732-3,355,185 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 13 transcripts (splice variants), 2 paralogues and is associated with 88 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378398.3	PRDM16-201	8721	1276aa	ENSP00000367651.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA13 Q9HAZ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441472.2	PRDM16-202	8718	1275aa	ENSP00000407968.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WEV3 H0YA13	NM_022114.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000270722.5	PRDM16-001	8690	1276aa	ENSP00000270722.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41236	Q9HAZ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442529.2	PRDM16-203	8661	1256aa	ENSP00000405253.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YTA5	NM_199454.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378391.2	PRDM16-003	5447	1257aa	ENSP00000367643.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44048	Q9HAZ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511072.1	PRDM16-007	4282	1178aa	ENSP00000426975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514189.1	PRDM16-008	4236	1177aa	ENSP00000421400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509860.1	PRDM16-002	3737	1084aa	ENSP00000425796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA13	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000463591.1	PRDM16-004	384	53aa	ENSP00000476002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQL6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512462.1	PRDM16-009	3723	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000378389.5	PRDM16-005	1142	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000607632.1	PRDM16-010	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000606170.1	PRDM16-011	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Favourite species

All species

Recent locations

Gene: PRDM16 ENSG00000142611

Summary