Description
PR domain containing 16 [Source:HGNC Symbol;Acc:14000]
Gene Synonyms
CMD1LL, KIAA1675, LVNC8, MEL1, MGC166915, PFM13
Location
Chromosome 1: 2,985,732-3,355,185 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 13 transcripts (splice variants), 2 paralogues and is associated with 68 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000270722.5 | PRDM16-001 | 8690 | 1276aa | ENSP00000270722.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41236 | Q9HAZ2 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000378398.3 | PRDM16-201 | 8721 | 1276aa | ENSP00000367651.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YA13 Q9HAZ2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000441472.2 | PRDM16-202 | 8718 | 1275aa | ENSP00000407968.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WEV3 H0YA13 | NM_022114.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000442529.2 | PRDM16-203 | 8661 | 1256aa | ENSP00000405253.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3YTA5 | NM_199454.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000378391.2 | PRDM16-003 | 5447 | 1257aa | ENSP00000367643.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44048 | Q9HAZ2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000511072.1 | PRDM16-007 | 4282 | 1178aa | ENSP00000426975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RDW0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000514189.1 | PRDM16-008 | 4236 | 1177aa | ENSP00000421400.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFY3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000509860.1 | PRDM16-002 | 3737 | 1084aa | ENSP00000425796.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YA13 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000463591.1 | PRDM16-004 | 384 | 53aa | ENSP00000476002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U3KQL6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000512462.1 | PRDM16-009 | 3723 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000378389.5 | PRDM16-005 | 1142 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000607632.1 | PRDM16-010 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000606170.1 | PRDM16-011 | 557 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
