Description
nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:7672]
Gene Synonyms
KIAA1047, MGC104216, N-CoR, N-CoR1, TRAC1, hCIT529I10, hN-CoR
Location
Chromosome 17: 15,932,471-16,121,499 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 27 transcripts (splice variants), 1 paralogue and is associated with 132 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000268712.3 | NCOR1-001 | 10720 | 2440aa | ENSP00000268712.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11175 | B4DJ25 C9JAP0 O75376 Q9NSZ0 | NM_006311.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395851.1 | NCOR1-003 | 7950 | 2337aa | ENSP00000379192.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54095 | C9JAP0 O75376 | NM_001190440.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395849.2 | NCOR1-018 | 3419 | 1071aa | ENSP00000379190.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DJ25 Q9NSZ0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000395857.3 | NCOR1-201 | 3419 | 1024aa | ENSP00000379198.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DJ25 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395848.1 | NCOR1-007 | 3106 | 914aa | ENSP00000379189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54094 | O75376 | NM_001190438.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000436828.1 | NCOR1-002 | 1969 | 537aa | ENSP00000387727.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAP0 E7EVU5 Q05CG3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000411510.1 | NCOR1-009 | 1883 | 545aa | ENSP00000407998.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAP0 E7EW50 Q86W52 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000582357.1 | NCOR1-017 | 1877 | 546aa | ENSP00000462308.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAP0 J3KS51 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430577.2 | NCOR1-012 | 1204 | 125aa | ENSP00000410784.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAP0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000580554.1 | NCOR1-015 | 650 | 217aa | ENSP00000463169.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000579606.1 | NCOR1-025 | 551 | 184aa | ENSP00000462281.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000579573.2 | NCOR1-026 | 549 | 183aa | ENSP00000461959.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRE4 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000436068.1 | NCOR1-006 | 274 | 92aa | ENSP00000389839.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000603989.1 | NCOR1-029 | 247 | 57aa | ENSP00000474008.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R380 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000460276.1 | NCOR1-008 | 1848 | 88aa | ENSP00000462794.1 | Nonsense mediated decay | J3KT44 | - | - | |
| ENST00000583226.1 | NCOR1-028 | 614 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000466825.1 | NCOR1-011 | 589 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470782.1 | NCOR1-005 | 3987 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000458113.2 | NCOR1-022 | 3490 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464381.1 | NCOR1-010 | 2474 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000580617.1 | NCOR1-024 | 1352 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000585296.1 | NCOR1-020 | 983 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000584872.1 | NCOR1-027 | 865 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472189.1 | NCOR1-013 | 793 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583234.1 | NCOR1-014 | 755 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000582565.1 | NCOR1-023 | 672 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000579974.1 | NCOR1-021 | 406 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
