Description
calsyntenin 3 [Source:HGNC Symbol;Acc:18371]
Gene Synonyms
CDHR14, CS3, CSTN3, KIAA0726, alcbeta
Location
Chromosome 12: 7,282,294-7,311,541 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 16 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000537408.1 | CLSTN3-002 | 4296 | 968aa | ENSP00000440679.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5C6 F5H5D7 F5H7C7 Q9BQT9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000266546.6 | CLSTN3-001 | 4185 | 956aa | ENSP00000266546.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8575 | F5H172 F5H5C6 F5H5D7 F5H7C7 Q9BQT9 | NM_014718.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541953.1 | CLSTN3-004 | 570 | 134aa | ENSP00000443959.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H172 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539982.1 | CLSTN3-009 | 570 | 176aa | ENSP00000442801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5C6 F5H5D7 F5H746 F5H7C7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534830.1 | CLSTN3-008 | 547 | 154aa | ENSP00000443490.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5C6 F5H5D7 F5H7C7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545663.1 | CLSTN3-006 | 533 | 142aa | ENSP00000442612.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D7 F5H7C7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535452.1 | CLSTN3-007 | 533 | 129aa | ENSP00000443468.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000331148.5 | CLSTN3-003 | 2288 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000535313.1 | CLSTN3-015 | 787 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000541667.1 | CLSTN3-005 | 671 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000535668.1 | CLSTN3-016 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000544584.1 | CLSTN3-012 | 546 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000540931.1 | CLSTN3-011 | 910 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000538933.1 | CLSTN3-010 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000541770.1 | CLSTN3-013 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000542663.1 | CLSTN3-014 | 390 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
