Description
integrin, alpha 7 [Source:HGNC Symbol;Acc:6143]
Location
Chromosome 12: 56,078,352-56,109,827 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 23 transcripts (splice variants), 17 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000257880.7 | ITGA7-201 | 4348 | 1162aa | ENSP00000257880.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q13683 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000394230.2 | ITGA7-203 | 4228 | 1122aa | ENSP00000377777.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BYL2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000394229.2 | ITGA7-202 | 4216 | 1118aa | ENSP00000377776.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2C6 H2N331 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000257879.6 | ITGA7-001 | 4120 | 1137aa | ENSP00000257879.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8888 | G3V2C6 Q13683 Q4LE35 | NM_002206.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000347027.6 | ITGA7-004 | 4084 | 1131aa | ENSP00000343009.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2C6 J3KNV4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000553804.1 | ITGA7-002 | 3935 | 1141aa | ENSP00000452120.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55832 | Q13683 | NM_001144996.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000555728.1 | ITGA7-014 | 3930 | 1181aa | ENSP00000452387.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q13683 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000452168.2 | ITGA7-003 | 3763 | 1044aa | ENSP00000393844.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44914 | Q13683 | NM_001144997.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000557555.1 | ITGA7-005 | 817 | 205aa | ENSP00000451039.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000557257.1 | ITGA7-011 | 576 | 153aa | ENSP00000450578.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2C6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554327.1 | ITGA7-018 | 1965 | 109aa | ENSP00000450693.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000555687.1 | ITGA7-019 | 573 | 55aa | ENSP00000451311.1 | Nonsense mediated decay | G3V2Q6 G3V3L8 | - | - | |
| ENST00000555809.1 | ITGA7-020 | 561 | 48aa | ENSP00000450798.1 | Nonsense mediated decay | G3V2Q6 | - | - | |
| ENST00000556273.1 | ITGA7-006 | 558 | 98aa | ENSP00000450679.1 | Nonsense mediated decay | G3V2I4 | - | - | |
| ENST00000553893.1 | ITGA7-010 | 558 | 48aa | ENSP00000452467.1 | Nonsense mediated decay | G3V2Q6 | - | - | |
| ENST00000554724.1 | ITGA7-012 | 552 | 35aa | ENSP00000452043.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000557058.1 | ITGA7-017 | 1040 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553276.1 | ITGA7-009 | 972 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000554543.1 | ITGA7-013 | 707 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000554359.1 | ITGA7-015 | 588 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553737.1 | ITGA7-007 | 570 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556371.1 | ITGA7-008 | 493 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557488.1 | ITGA7-016 | 296 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
