Description
spectrin repeat containing, nuclear envelope 1 [Source:HGNC Symbol;Acc:17089]
Gene Synonyms
8B, ARCA1, C6orf98, CPG2, EDMD4, KIAA0796, KIAA1262, KIAA1756, MYNE1, Nesp1, Nesprin-1, SCAR8, SYNE-1B, dJ45H2.2, enaptin
Location
Chromosome 6: 152,442,819-152,958,936 reverse strand.
GRCh37:CM000668.1
About this gene
This gene has 41 transcripts (splice variants), 12 paralogues and is associated with 7 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000367255.5 | SYNE1-001 | 27748 | 8797aa | ENSP00000356224.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5236 | Q8NF91 | NM_182961.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000265368.4 | SYNE1-201 | 27745 | 8797aa | ENSP00000265368.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000448038.1 | SYNE1-204 | 27601 | 8749aa | ENSP00000390975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PEL9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000423061.1 | SYNE1-002 | 27436 | 8749aa | ENSP00000396024.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5235 | Q8NF91 | NM_033071.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000341594.5 | SYNE1-202 | 26581 | 8409aa | ENSP00000341887.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENN3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000356820.4 | SYNE1-203 | 10835 | 3321aa | ENSP00000349276.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000367248.3 | SYNE1-009 | 7165 | 1433aa | ENSP00000356217.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXQ8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000367251.3 | SYNE1-006 | 5837 | 1654aa | ENSP00000356220.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y325 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000367253.4 | SYNE1-010 | 5189 | 1725aa | ENSP00000356222.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8NF91 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000367257.4 | SYNE1-033 | 5022 | 1355aa | ENSP00000356226.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z9Y6 H0Y326 Q5BKU8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000413186.2 | SYNE1-029 | 4860 | 1443aa | ENSP00000414510.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8NF91 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000539504.1 | SYNE1-005 | 3768 | 952aa | ENSP00000441052.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JV20 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000354674.4 | SYNE1-027 | 3154 | 975aa | ENSP00000346701.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WAI0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000537750.1 | SYNE1-030 | 2850 | 615aa | ENSP00000441264.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000466159.2 | SYNE1-021 | 2610 | 754aa | ENSP00000446021.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4Q0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000495090.2 | SYNE1-022 | 1907 | 612aa | ENSP00000438508.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H422 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000454018.2 | SYNE1-012 | 1548 | 511aa | ENSP00000390858.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3ZCV0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000540663.1 | SYNE1-036 | 776 | 242aa | ENSP00000437411.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6R8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000537033.1 | SYNE1-037 | 647 | 195aa | ENSP00000443879.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000469439.1 | SYNE1-013 | 630 | 207aa | ENSP00000442805.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000474655.2 | SYNE1-023 | 1798 | 62aa | ENSP00000440193.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000347037.5 | SYNE1-004 | 3798 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000460912.2 | SYNE1-028 | 3664 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000536990.1 | SYNE1-034 | 3003 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000535896.2 | SYNE1-031 | 1388 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000481502.1 | SYNE1-020 | 585 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000476519.1 | SYNE1-025 | 582 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000498751.1 | SYNE1-024 | 578 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000367256.5 | SYNE1-011 | 10742 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000409694.2 | SYNE1-015 | 10634 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000461872.2 | SYNE1-014 | 10075 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000478916.1 | SYNE1-017 | 7780 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000471834.1 | SYNE1-018 | 7229 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000490135.2 | SYNE1-003 | 5707 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000489156.1 | SYNE1-016 | 1891 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000468937.2 | SYNE1-019 | 688 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000490866.2 | SYNE1-026 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000535081.1 | SYNE1-035 | 561 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000545694.1 | SYNE1-038 | 526 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000472563.2 | SYNE1-007 | 525 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000488376.2 | SYNE1-008 | 414 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |