Description
CAP-GLY domain containing linker protein 1 [Source:HGNC Symbol;Acc:10461]
Gene Synonyms
CLIP, CLIP-170, CLIP170, CYLN1, RSN
Location
Chromosome 12: 122,755,979-122,907,179 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 18 transcripts (splice variants), 7 paralogues and is associated with 78 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000358808.2 | CLIP1-201 | 5880 | 1427aa | ENSP00000351665.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9232 | F5H270 F5H367 P30622 | NM_002956.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000302528.7 | CLIP1-001 | 5833 | 1427aa | ENSP00000303585.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9232 | F5H270 F5H367 P30622 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000361654.4 | CLIP1-007 | 5568 | 1316aa | ENSP00000355314.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H270 F5H367 J3KP58 | NM_198240.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000537178.1 | CLIP1-002 | 5229 | 1392aa | ENSP00000445531.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9233 | F5H270 F5H367 P30622 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000545889.1 | CLIP1-008 | 4633 | 1013aa | ENSP00000438743.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0N7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000540338.1 | CLIP1-003 | 4400 | 1438aa | ENSP00000439093.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58285 | F5H270 F5H367 P30622 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000540539.1 | CLIP1-015 | 2592 | 117aa | ENSP00000437617.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6H4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000540304.1 | CLIP1-005 | 2554 | 803aa | ENSP00000437786.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H270 F5H367 F5H6A0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000537004.1 | CLIP1-006 | 2000 | 428aa | ENSP00000441409.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H270 F5H367 F6VGP8 Q86WU4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535290.1 | CLIP1-017 | 665 | 108aa | ENSP00000439472.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H270 F5H367 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539080.1 | CLIP1-016 | 560 | 83aa | ENSP00000445387.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H367 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541108.1 | CLIP1-004 | 1658 | 350aa | ENSP00000446379.1 | Nonsense mediated decay | F5H1T5 F5H270 F5H367 | - | - | |
| ENST00000536634.1 | CLIP1-013 | 929 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000514271.2 | CLIP1-011 | 3493 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000538120.1 | CLIP1-010 | 2472 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000501271.2 | CLIP1-014 | 2426 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000541410.1 | CLIP1-012 | 2379 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000543205.1 | CLIP1-009 | 2018 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
