Description
membrane-spanning 4-domains, subfamily A, member 6A [Source:HGNC Symbol;Acc:13375]
Gene Synonyms
4SPAN3, 4SPAN3.2, CD20L3, MS4A6, MST090, MSTP090
Location
Chromosome 11: 59,939,081-59,952,139 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 22 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000528851.1 | MS4A6A-002 | 1806 | 225aa | ENSP00000431901.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44615 | E9PNG6 Q9H2W1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000426738.2 | MS4A6A-202 | 1536 | 180aa | ENSP00000392770.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EMT7 E9PNG6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000323961.3 | MS4A6A-201 | 1535 | 248aa | ENSP00000315878.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7981 | E9PNG6 Q9H2W1 | NM_152851.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000530839.1 | MS4A6A-001 | 1383 | 248aa | ENSP00000436979.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7981 | E9PNG6 Q9H2W1 | NM_152852.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000412309.2 | MS4A6A-006 | 1284 | 253aa | ENSP00000403212.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58134 | E9PL03 E9PMN8 E9PNG6 F8W9K1 | NM_022349.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000529054.1 | MS4A6A-004 | 1160 | 276aa | ENSP00000435844.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL03 E9PMN8 E9PNG6 E9PSA9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000532169.1 | MS4A6A-005 | 1136 | 141aa | ENSP00000431266.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNG6 Q9H2W1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000420732.2 | MS4A6A-003 | 863 | 178aa | ENSP00000392921.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44616 | E9PNG6 Q9H2W1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000533023.1 | MS4A6A-014 | 780 | 114aa | ENSP00000436172.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNG6 G5EA21 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000533409.1 | MS4A6A-009 | 682 | 23aa | ENSP00000437152.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNG6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533989.1 | MS4A6A-018 | 586 | 113aa | ENSP00000436133.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000534596.1 | MS4A6A-013 | 577 | 101aa | ENSP00000433436.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL03 E9PMN8 E9PNG6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531531.1 | MS4A6A-016 | 567 | 77aa | ENSP00000433012.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMN8 E9PNG6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527254.1 | MS4A6A-020 | 790 | 120aa | ENSP00000435630.1 | Nonsense mediated decay | E9PJ78 E9PNG6 | - | - | |
| ENST00000529906.1 | MS4A6A-015 | 589 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528925.1 | MS4A6A-008 | 509 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000526677.1 | MS4A6A-007 | 2416 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531914.1 | MS4A6A-019 | 640 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533660.1 | MS4A6A-011 | 571 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000525549.1 | MS4A6A-012 | 552 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000526697.1 | MS4A6A-010 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530179.1 | MS4A6A-017 | 548 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
