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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTCD1 ENSG00000106246

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Description

pentatricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:22198]

Gene Synonyms

KIAA0632

Location

Chromosome 7: 99,014,362-99,063,787 reverse strand.

GRCh37:CM000669.1

About this gene

This gene has 6 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292478.4	PTCD1-001	5582	700aa	ENSP00000292478.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34691	A4D273 C9JBD7 C9JGL8 C9JQN9 C9JWL7 O75127	NM_015545.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555673.1	PTCD1-201	2491	749aa	ENSP00000450995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56496	A4D273 C9JBD7 C9JGL8 C9JQN9 C9JWL7 G3V325	NM_001198879.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430982.1	PTCD1-007	571	164aa	ENSP00000390530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JGL8 C9JQN9 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430029.1	PTCD1-004	556	144aa	ENSP00000408059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JQN9 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419981.1	PTCD1-002	533	106aa	ENSP00000401600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485746.1	PTCD1-005	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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