Description
TRIO and F-actin binding protein [Source:HGNC Symbol;Acc:17009]
Gene Synonyms
DFNB28, HRIHFB2122, KIAA1662, TARA, Tara, dJ37E16.4
Location
Chromosome 22: 38,093,011-38,172,563 forward strand.
GRCh37:CM000684.1
About this gene
This gene has 11 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000406386.3 | TRIOBP-001 | 10129 | 2365aa | ENSP00000384312.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43015 | F6WMF4 F6WYE2 Q9H2D6 | NM_001039141.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000403663.2 | TRIOBP-006 | 2324 | 652aa | ENSP00000386026.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43016 | F6WMF4 F6WYE2 F8W6V6 | NM_007032.5 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000407319.2 | TRIOBP-005 | 2125 | 431aa | ENSP00000383913.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33644 | F6WMF4 F6WYE2 Q9H2D6 | NM_138632.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000418339.1 | TRIOBP-008 | 939 | 265aa | ENSP00000396946.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6TR96 F6WMF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428075.1 | TRIOBP-012 | 931 | 311aa | ENSP00000399006.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000417857.1 | TRIOBP-010 | 919 | 256aa | ENSP00000387881.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6WMF4 F6WYE2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000452519.1 | TRIOBP-011 | 586 | 83aa | ENSP00000407542.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6WMF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000344404.6 | TRIOBP-002 | 7300 | 104aa | ENSP00000340312.6 | Nonsense mediated decay | H7BXW4 | - | - | |
| ENST00000413051.2 | TRIOBP-009 | 904 | 102aa | ENSP00000400680.2 | Nonsense mediated decay | H0Y5T8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000492485.1 | TRIOBP-003 | 3948 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000331103.5 | TRIOBP-013 | 513 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
