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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LPHN1 ENSG00000072071

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Description

latrophilin 1 [Source:HGNC Symbol;Acc:20973]

Gene Synonyms

CIRL1, CL1, KIAA0821, LEC2

Location

Chromosome 19: 14,260,750-14,316,999 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 8 transcripts (splice variants) and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340736.6	LPHN1-001	5658	1474aa	ENSP00000340688.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32928	O94910	NM_001008701.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361434.3	LPHN1-002	5610	1469aa	ENSP00000355328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12307	O94910	NM_014921.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592164.1	LPHN1-005	791	264aa	ENSP00000465453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000593005.1	LPHN1-006	729	243aa	ENSP00000468197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000589616.1	LPHN1-004	675	225aa	ENSP00000468711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESH3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000591528.1	LPHN1-007	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588677.1	LPHN1-008	604	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590223.1	LPHN1-003	424	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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