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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ROGDI ENSG00000067836

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Description

rogdi homolog (Drosophila) [Source:HGNC Symbol;Acc:29478]

Gene Synonyms

FLJ22386, KTZS

Location

Chromosome 16: 4,846,969-4,852,951 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 16 transcripts (splice variants) and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322048.7	ROGDI-001	1735	287aa	ENSP00000322832.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10523	D3DUE5 Q9GZN7	NM_024589.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591392.1	ROGDI-015	811	253aa	ENSP00000467509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586504.1	ROGDI-009	651	217aa	ENSP00000465076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000587711.1	ROGDI-014	570	171aa	ENSP00000467459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586153.1	ROGDI-016	457	121aa	ENSP00000464699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EID1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592019.1	ROGDI-010	371	73aa	ENSP00000468334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588201.1	ROGDI-005	1530	119aa	ENSP00000466529.1	Nonsense mediated decay		K7EMJ5	-	-
ENST00000587377.1	ROGDI-003	1394	230aa	ENSP00000468343.1	Nonsense mediated decay		K7ERP1	-	-
ENST00000587843.1	ROGDI-002	1362	68aa	ENSP00000465970.1	Nonsense mediated decay		K7EL91	-	-
ENST00000586336.1	ROGDI-008	893	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591292.1	ROGDI-006	2684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585871.1	ROGDI-007	983	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592112.1	ROGDI-004	968	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585653.1	ROGDI-013	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589543.1	ROGDI-011	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590198.1	ROGDI-012	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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