Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:11106]
Gene Synonyms
BAF60A, CRACD1, Rsc6p
Location
Chromosome 12: 50,478,755-50,494,495 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 12 transcripts (splice variants), 2 paralogues and is associated with 70 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000394963.4 | SMARCD1-001 | 3658 | 515aa | ENSP00000378414.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8797 | F8VW95 Q96GM5 | NM_003076.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000381513.4 | SMARCD1-002 | 3237 | 474aa | ENSP00000370924.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8798 | F8VW95 Q96GM5 | NM_139071.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000548573.1 | SMARCD1-012 | 2095 | 313aa | ENSP00000448627.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VRQ4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000550477.1 | SMARCD1-010 | 911 | 289aa | ENSP00000448030.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VUB0 F8VW95 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551966.1 | SMARCD1-011 | 881 | 278aa | ENSP00000447386.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VW95 F8VZ70 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551497.1 | SMARCD1-004 | 536 | 113aa | ENSP00000449825.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VW95 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549274.1 | SMARCD1-008 | 611 | 115aa | ENSP00000447909.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000549526.1 | SMARCD1-009 | 401 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547247.1 | SMARCD1-003 | 1584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551352.1 | SMARCD1-007 | 621 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547637.1 | SMARCD1-005 | 587 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550280.1 | SMARCD1-006 | 567 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
