Description
integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) [Source:HGNC Symbol;Acc:6139]
Gene Synonyms
CD49C, CD49c, GAP-B3, GAPB3, ILNEB, MSK18, VCA-2, VL3A, VLA3a
Location
Chromosome 17: 48,133,332-48,167,845 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 17 transcripts (splice variants), 17 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000320031.8 | ITGA3-001 | 4888 | 1051aa | ENSP00000315190.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11558 | B4E0H8 P26006 | NM_005501.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000007722.7 | ITGA3-020 | 3665 | 1066aa | ENSP00000007722.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11557 | P26006 Q86SW1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000544892.1 | ITGA3-201 | 1810 | 294aa | ENSP00000446133.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDT0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000506827.1 | ITGA3-014 | 827 | 221aa | ENSP00000426142.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000512553.1 | ITGA3-010 | 351 | 117aa | ENSP00000466652.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EMU3 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000506401.2 | ITGA3-003 | 1817 | 142aa | ENSP00000422826.2 | Nonsense mediated decay | D6R9X8 | - | - | |
| ENST00000510809.1 | ITGA3-012 | 518 | 84aa | ENSP00000425980.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000504417.1 | ITGA3-018 | 227 | 29aa | ENSP00000467851.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000505306.1 | ITGA3-002 | 5479 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000506437.1 | ITGA3-006 | 3055 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570989.1 | ITGA3-019 | 2495 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000514834.1 | ITGA3-017 | 860 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505552.1 | ITGA3-011 | 600 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505612.1 | ITGA3-013 | 576 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000508100.1 | ITGA3-009 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515147.1 | ITGA3-016 | 535 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000507771.1 | ITGA3-015 | 399 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
