Description
upstream transcription factor 1 [Source:HGNC Symbol;Acc:12593]
Gene Synonyms
BHLHB11, FCHL, FCHL1, HYPLIP1, MLTF, MLTFI, UEF, USF, bHLHb11
Location
Chromosome 1: 161,009,041-161,015,767 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 12 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000368021.3 | USF1-001 | 1807 | 310aa | ENSP00000357000.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1214 | E9PJ52 E9PQA2 P22415 | NM_007122.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000435396.1 | USF1-201 | 1765 | 251aa | ENSP00000390109.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PQA2 P22415 | NM_207005.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000368020.1 | USF1-002 | 1717 | 310aa | ENSP00000356999.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1214 | E9PJ52 E9PQA2 P22415 | NM_001276373.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000368019.1 | USF1-003 | 998 | 282aa | ENSP00000356998.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1AQP1 E9PJ52 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000531842.1 | USF1-011 | 720 | 217aa | ENSP00000435005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJ52 E9PME6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534633.1 | USF1-008 | 610 | 105aa | ENSP00000432533.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PQA2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000528768.1 | USF1-009 | 505 | 165aa | ENSP00000433041.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000473969.2 | USF1-004 | 1092 | 48aa | ENSP00000435671.1 | Nonsense mediated decay | E9PJ52 | - | - | |
| ENST00000472217.1 | USF1-005 | 1097 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496363.1 | USF1-006 | 990 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491629.1 | USF1-007 | 933 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529476.1 | USF1-010 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
