Description
L1 cell adhesion molecule [Source:HGNC Symbol;Acc:6470]
Gene Synonyms
CAML1, CD171, HSAS, HSAS1, MASA, MIC5, N-CAM-L1, N-CAML1, NCAM-L1, S10, SPG1
Location
Chromosome X: 153,126,969-153,174,677 reverse strand.
GRCh37:CM000685.1
View alleles of this gene on alternative sequences
About this gene
This gene has 20 transcripts (splice variants), 1 gene allele, 17 paralogues and is associated with 9 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000370060.1 | L1CAM-001 | 5113 | 1257aa | ENSP00000359077.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14733 | E7EPI4 E9PHJ4 P32004 Q7Z2F9 Q7Z2H2 Q7Z2I3 Q7Z2J0 Q7Z2J6 Q7Z2J8 Q7Z2J9 Q7Z3Z9 Q86SE4 | NM_001278116.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000543994.1 | L1CAM-204 | 5033 | 1259aa | ENSP00000438430.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H025 Q7Z2F9 Q7Z2H2 Q7Z2I3 Q7Z2J0 Q7Z2J6 Q7Z2J8 Q7Z2J9 Q86SE4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000370057.3 | L1CAM-202 | 5027 | 1257aa | ENSP00000359074.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14733 | E7EPI4 E9PHJ4 P32004 Q7Z2F9 Q7Z2H2 Q7Z2I3 Q7Z2J0 Q7Z2J6 Q7Z2J8 Q7Z2J9 Q7Z3Z9 Q86SE4 | NM_024003.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000538883.1 | L1CAM-203 | 5021 | 1255aa | ENSP00000439645.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H1H0 Q7Z2F9 Q7Z2H2 Q7Z2I3 Q7Z2J0 Q7Z2J6 Q7Z2J8 Q7Z2J9 Q86SE4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000361981.3 | L1CAM-201 | 5000 | 1248aa | ENSP00000354712.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48192 | E7EMY4 E7EVM4 P32004 Q7Z2F9 Q7Z2H2 Q7Z2I3 Q7Z2J0 Q7Z2J6 Q7Z2J8 Q7Z2J9 Q86SE4 | NM_001143963.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000370055.1 | L1CAM-006 | 4655 | 1248aa | ENSP00000359072.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48192 | E7EMY4 E7EVM4 P32004 Q7Z2F9 Q7Z2H2 Q7Z2I3 Q7Z2J0 Q7Z2J6 Q7Z2J8 Q7Z2J9 Q86SE4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000361699.4 | L1CAM-002 | 3888 | 1253aa | ENSP00000355380.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14734 | E7EPI4 E9PHJ4 P32004 Q7Z2F9 Q7Z2H2 Q7Z2I3 Q7Z2J0 Q7Z2J6 Q7Z2J8 Q7Z2J9 Q86SE4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000370058.3 | L1CAM-003 | 692 | 153aa | ENSP00000359075.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BLW5 Q7Z2J6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000439496.1 | L1CAM-011 | 655 | 150aa | ENSP00000402407.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EPI4 E9PHJ4 Q7Z2F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000458029.1 | L1CAM-010 | 637 | 83aa | ENSP00000396079.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PHJ4 Q7Z2F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000407935.2 | L1CAM-017 | 576 | 128aa | ENSP00000384902.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EMY4 E7EVM4 Q7Z2F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000455590.1 | L1CAM-007 | 570 | 190aa | ENSP00000397792.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7Z2J8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000420165.1 | L1CAM-008 | 569 | 90aa | ENSP00000392524.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EMY4 Q7Z2F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000484587.1 | L1CAM-005 | 739 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000491983.1 | L1CAM-015 | 608 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000464967.1 | L1CAM-016 | 593 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000474853.1 | L1CAM-014 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000496122.1 | L1CAM-013 | 561 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000460553.1 | L1CAM-009 | 556 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000484652.1 | L1CAM-012 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |