Description
paired box 5 [Source:HGNC Symbol;Acc:8619]
Gene Synonyms
BSAP, PAX-5
Location
Chromosome 9: 36,833,272-37,034,103 reverse strand.
GRCh37:CM000671.1
About this gene
This gene has 16 transcripts (splice variants), 8 paralogues and is associated with 77 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000358127.4 | PAX5-001 | 8536 | 391aa | ENSP00000350844.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6607 | C0KTE1 E7ERK2 Q02548 | NM_016734.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000377853.2 | PAX5-004 | 1487 | 362aa | ENSP00000367084.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65048 | Q02548 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000377852.2 | PAX5-003 | 1472 | 357aa | ENSP00000367083.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65047 | C0KTE3 Q02548 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000523241.1 | PAX5-006 | 1342 | 324aa | ENSP00000429637.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65045 | E7EQT0 | NM_001280549.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000520154.1 | PAX5-007 | 1255 | 295aa | ENSP00000429291.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65044 | E7ERW5 | NM_001280550.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000414447.1 | PAX5-013 | 1056 | 348aa | ENSP00000412188.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65043 | Q02548 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000522003.1 | PAX5-009 | 1019 | 283aa | ENSP00000429359.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65040 | C0KTE1 E7ERK2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000377847.2 | PAX5-012 | 996 | 328aa | ENSP00000367078.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65046 | C0KTE5 E7ES87 Q02548 | NM_001280552.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000520281.1 | PAX5-005 | 969 | 319aa | ENSP00000430773.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65042 | Q02548 | NM_001280553.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000446742.1 | PAX5-008 | 885 | 291aa | ENSP00000404687.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65041 | C0KTE3 Q02548 | NM_001280555.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000523145.1 | PAX5-010 | 830 | 220aa | ENSP00000429197.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS65039 | C0KTE5 E7ES87 | NM_001280551.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000524340.1 | PAX5-014 | 659 | 218aa | ENSP00000429404.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C0KTE2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000522932.1 | PAX5-015 | 184 | 60aa | ENSP00000428670.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C0KTE9 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000377840.2 | PAX5-002 | 1444 | 288aa | ENSP00000367071.2 | Nonsense mediated decay | C0KTE4 Q02548 | - | - | |
| ENST00000523493.1 | PAX5-011 | 1112 | 307aa | ENSP00000431038.1 | Nonsense mediated decay | Q02548 | - | - | |
| ENST00000520083.1 | PAX5-016 | 832 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
