Gene: CHD2 ENSG00000173575

Description

chromodomain helicase DNA binding protein 2 [Source:HGNC Symbol;Acc:1917]

Gene Synonyms

DKFZp547I1315, DKFZp686E01200, DKFZp781D1727, EEOC, FLJ38614

Location

Chromosome 15: 93,426,526-93,571,237 forward strand.

GRCh37:CM000677.1

About this gene

This gene has 19 transcripts (splice variants), 8 paralogues and is associated with 66 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394196.4	CHD2-001	9857	1828aa	ENSP00000377747.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10374	G3V418 G3V4S8 O14647 Q3YLD5 Q3YLD6 Q6AI05	NM_001271.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557381.1	CHD2-003	7764	1739aa	ENSP00000451366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V418 G3V4S8 O14647 Q3YLD5 Q3YLD6 Q6AI05	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420239.2	CHD2-005	2221	501aa	ENSP00000406581.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45356	G3V4S8 O14647 Q3YLD5 Q3YLD6 Q6AI05	NM_001042572.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536619.1	CHD2-008	2131	514aa	ENSP00000443618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3I4 Q3YLD5 Q3YLD6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556722.1	CHD2-013	1095	183aa	ENSP00000451964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4S8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557759.1	CHD2-019	834	181aa	ENSP00000451539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V418	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557116.1	CHD2-012	340	113aa	ENSP00000457493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU65	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000582447.1	CHD2-029	649	35aa	ENSP00000462080.1	Nonsense mediated decay		J3KRM9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554828.1	CHD2-015	396	77aa	ENSP00000464078.1	Nonsense mediated decay		J3KRM9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554122.1	CHD2-002	1211	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557340.1	CHD2-011	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555582.2	CHD2-017	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555753.1	CHD2-010	361	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556930.1	CHD2-007	4503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000309818.5	CHD2-004	2037	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556270.1	CHD2-014	1052	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553323.1	CHD2-009	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553402.1	CHD2-018	734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554771.1	CHD2-006	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: CHD2 ENSG00000173575

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EMBL-EBI User Survey 2024

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Gene: CHD2 ENSG00000173575

Summary