Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: APLF ENSG00000169621

.

Description

aprataxin and PNKP like factor [Source:HGNC Symbol;Acc:28724]

Gene Synonyms

APFL, C2orf13, MGC47799, PALF, XIP1, Xip1

Location

Chromosome 2: 68,694,693-68,858,004 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303795.4	APLF-001	3847	511aa	ENSP00000307004.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1888	Q8IW19	NM_173545.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445692.1	APLF-004	3906	280aa	ENSP00000393403.1	Nonsense mediated decay		F8WET0	-	-
ENST00000529851.1	APLF-006	2863	185aa	ENSP00000432297.1	Nonsense mediated decay		E9PRH6	-	-
ENST00000471727.1	APLF-002	1633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488585.1	APLF-005	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

.

Summary

.

.