Gene: RAPGEF6 ENSG00000158987

Description

Rap guanine nucleotide exchange factor (GEF) 6 [Source:HGNC Symbol;Acc:20655]

Gene Synonyms

KIA001LB, PDZ-GEF2, PDZGEF2, RA-GEF-2, RAGEF2

Location

Chromosome 5: 130,759,614-130,970,929 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 15 transcripts (splice variants) and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296859.6	RAPGEF6-006	5618	1609aa	ENSP00000296859.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54900	D6RB02 Q8TEU7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000509018.1	RAPGEF6-001	8357	1601aa	ENSP00000421684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34225	D6RB02 Q8TEU7	NM_016340.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000307984.5	RAPGEF6-201	8079	1509aa	ENSP00000309298.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54901	D6RB02 Q8TEU7	NM_001164387.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000507093.1	RAPGEF6-003	5727	1504aa	ENSP00000426081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54899	D6RB02 Q8TEU7	NM_001164388.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000308008.6	RAPGEF6-004	4176	1391aa	ENSP00000311419.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54898	D6RB02 Q8TEU7	NM_001164389.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000512052.1	RAPGEF6-005	3535	1114aa	ENSP00000426910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE77	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510071.1	RAPGEF6-008	3107	827aa	ENSP00000425389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54897	D6RB02 Q8TEU7	NM_001164390.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000513227.1	RAPGEF6-012	560	155aa	ENSP00000424574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504575.1	RAPGEF6-013	552	155aa	ENSP00000425891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD23 D6RIH0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504039.1	RAPGEF6-014	542	149aa	ENSP00000427102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515170.1	RAPGEF6-002	4103	1204aa	ENSP00000425772.1	Nonsense mediated decay		B7Z7Y1 D6RB02	-	-
ENST00000503398.2	RAPGEF6-010	149	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512611.1	RAPGEF6-007	3683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514179.1	RAPGEF6-009	2200	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504919.1	RAPGEF6-011	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: RAPGEF6 ENSG00000158987

Summary