Description
schlafen family member 13 [Source:HGNC Symbol;Acc:26481]
Gene Synonyms
FLJ31952, SLFN10
Location
Chromosome 17: 33,762,115-33,775,856 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 12 transcripts (splice variants), 85 orthologues and 6 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000285013.6 | SLFN13-002 | 8469 | 897aa | ENSP00000285013.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32620 | B3KV92 E9PKT7 E9PM29 K7EPV8 Q68D06 | NM_144682.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000360502.2 | SLFN13-201 | 7239 | 579aa | ENSP00000353692.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KV92 E9PKT7 Q68D06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000526861.1 | SLFN13-004 | 6004 | 897aa | ENSP00000434439.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32620 | B3KV92 E9PKT7 E9PM29 K7EPV8 Q68D06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542635.1 | SLFN13-202 | 5921 | 897aa | ENSP00000444016.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32620 | B3KV92 E9PKT7 E9PM29 K7EPV8 Q68D06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000533791.1 | SLFN13-005 | 4121 | 897aa | ENSP00000467426.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32620 | B3KV92 E9PKT7 E9PM29 K7EPV8 Q68D06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000534689.1 | SLFN13-003 | 3058 | 579aa | ENSP00000435442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KV92 E9PKT7 Q68D06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000532210.1 | SLFN13-007 | 596 | 130aa | ENSP00000435328.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKT7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524511.1 | SLFN13-009 | 576 | 106aa | ENSP00000433181.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PM29 K7EPV8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531588.1 | SLFN13-006 | 550 | 77aa | ENSP00000467557.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EPV8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000530782.1 | SLFN13-001 | 3910 | 119aa | ENSP00000437298.1 | Nonsense mediated decay | E9PMV5 K7EPV8 | - | - | |
| ENST00000532774.1 | SLFN13-010 | 563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000526483.1 | SLFN13-008 | 463 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
