Description
cadherin 13 [Source:HGNC Symbol;Acc:1753]
Gene Synonyms
CDHH, P105
Location
Chromosome 16: 82,660,408-83,830,204 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 15 transcripts (splice variants) and 13 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000268613.10 | CDH13-009 | 2722 | 760aa | ENSP00000268613.10 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58485 | P55290 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
ENST00000566620.1 | CDH13-001 | 4001 | 713aa | ENSP00000454435.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58486 | F5H7W7 P55290 | NM_001257.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
ENST00000428848.3 | CDH13-005 | 2195 | 674aa | ENSP00000394557.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58487 | B7Z590 F5H7W7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
ENST00000567445.1 | CDH13-007 | 1456 | 67aa | ENSP00000456297.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7W7 H3BRL7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
ENST00000431540.3 | CDH13-003 | 831 | 190aa | ENSP00000408632.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56010 | F5H7W7 P55290 | NM_001220491.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
ENST00000565636.1 | CDH13-004 | 810 | 175aa | ENSP00000456491.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56009 | F5H7W7 P55290 | NM_001220492.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
ENST00000446376.2 | CDH13-201 | 528 | 175aa | ENSP00000388804.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56009 | F5H7W7 P55290 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
ENST00000539548.2 | CDH13-006 | 2199 | 52aa | ENSP00000442225.2 | Nonsense mediated decay | F5H7W7 | - | - | |
ENST00000568770.1 | CDH13-013 | 589 | 37aa | ENSP00000457149.1 | Nonsense mediated decay | H3BTF2 | - | - | |
ENST00000569144.1 | CDH13-012 | 583 | 56aa | ENSP00000457914.1 | Nonsense mediated decay | F5H7W7 H3BV21 | - | - | |
ENST00000562601.1 | CDH13-011 | 545 | 67aa | ENSP00000455781.1 | Nonsense mediated decay | H3BQH4 | - | - | |
ENST00000569454.1 | CDH13-015 | 877 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000562307.1 | CDH13-016 | 539 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000569455.1 | CDH13-010 | 535 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000566333.1 | CDH13-014 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |