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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBR1 ENSG00000136535

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Description

T-box, brain, 1 [Source:HGNC Symbol;Acc:11590]

Gene Synonyms

TBR-1, TES-56

Location

Chromosome 2: 162,272,605-162,282,381 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 6 transcripts (splice variants), 3 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389554.3	TBR1-001	4009	682aa	ENSP00000374205.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33310	B0AZS4 Q16650 Q56A81	NM_006593.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410035.1	TBR1-002	1454	395aa	ENSP00000387023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0AZS4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411412.1	TBR1-006	698	232aa	ENSP00000393934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0B1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000489530.1	TBR1-004	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477804.1	TBR1-003	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463544.1	TBR1-005	7185	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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