Description
PHD finger protein 21A [Source:HGNC Symbol;Acc:24156]
Gene Synonyms
BHC80, BM-006, KIAA1696
Location
Chromosome 11: 45,950,871-46,142,985 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 22 transcripts (splice variants), 1 paralogue and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000418153.2 | PHF21A-004 | 2730 | 680aa | ENSP00000398824.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44578 | E9PLV4 E9PNW9 E9PQM3 E9PR02 Q96BD5 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000257821.4 | PHF21A-201 | 7318 | 681aa | ENSP00000257821.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLV4 E9PNW9 E9PQM3 E9PR02 Q96BD5 | NM_001101802.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000323180.6 | PHF21A-002 | 3675 | 634aa | ENSP00000323152.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31474 | E9PLV4 E9PNW9 E9PQM3 E9PR02 Q96BD5 | NM_016621.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000525438.1 | PHF21A-010 | 577 | 26aa | ENSP00000437110.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529782.1 | PHF21A-011 | 561 | 62aa | ENSP00000435121.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLV4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529734.1 | PHF21A-007 | 557 | 101aa | ENSP00000436157.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLV4 E9PNW9 E9PQM3 E9PR02 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524497.1 | PHF21A-021 | 555 | 134aa | ENSP00000431273.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLU5 E9PNW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525676.1 | PHF21A-016 | 550 | 93aa | ENSP00000431964.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000532010.1 | PHF21A-019 | 546 | 9aa | ENSP00000435645.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531959.1 | PHF21A-020 | 507 | 133aa | ENSP00000432916.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLU5 E9PNW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527782.1 | PHF21A-008 | 490 | 11aa | ENSP00000434687.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533757.1 | PHF21A-009 | 466 | 51aa | ENSP00000432406.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNW9 E9PR02 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532028.1 | PHF21A-018 | 451 | 150aa | ENSP00000431621.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YCI1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000530587.1 | PHF21A-017 | 1293 | 116aa | ENSP00000435984.1 | Nonsense mediated decay | H0YEK2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000532883.1 | PHF21A-013 | 1051 | 82aa | ENSP00000432094.1 | Nonsense mediated decay | E9PNW9 E9PR02 E9PS51 | - | - | |
| ENST00000527753.1 | PHF21A-015 | 592 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000525679.1 | PHF21A-014 | 565 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528893.1 | PHF21A-012 | 457 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000530312.1 | PHF21A-006 | 276 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000527401.1 | PHF21A-003 | 8954 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000534766.1 | PHF21A-022 | 635 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000534724.1 | PHF21A-023 | 390 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
