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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CRB1 ENSG00000134376

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Description

crumbs homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:2343]

Gene Synonyms

LCA8, RP12

Location

Chromosome 1: 197,170,592-197,447,585 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 12 transcripts (splice variants), 14 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367400.3	CRB1-004	4932	1406aa	ENSP00000356370.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1390	B7Z824 P82279	NM_201253.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367397.1	CRB1-003	9023	674aa	ENSP00000356367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535699.1	CRB1-201	4691	1382aa	ENSP00000438786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58053	F5H0L2	NM_001257965.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367399.2	CRB1-005	3885	1294aa	ENSP00000356369.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53454	B7Z824 P82279	NM_001193640.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544212.1	CRB1-204	3474	887aa	ENSP00000444556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z824	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538660.1	CRB1-202	2942	870aa	ENSP00000438091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58052	P82279	NM_001257966.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543483.1	CRB1-203	1671	293aa	ENSP00000439579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1K8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000448952.1	CRB1-002	1031	42aa	ENSP00000395407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P82279	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484075.1	CRB1-001	5174	1376aa	ENSP00000433932.1	Nonsense mediated decay		P82279	-	-
ENST00000476483.1	CRB1-008	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480086.2	CRB1-007	413	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475659.1	CRB1-006	2423	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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