Description
peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:8850]
Gene Synonyms
PBD1A, PBD1B, ZWS, ZWS1
Location
Chromosome 7: 92,116,334-92,157,845 reverse strand.
GRCh37:CM000669.1
About this gene
This gene has 11 transcripts (splice variants) and is associated with 9 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000248633.4 | PEX1-001 | 4385 | 1283aa | ENSP00000248633.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5627 | B4DER6 O43933 Q96S69 Q96S70 | NM_000466.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000428214.1 | PEX1-004 | 3681 | 1226aa | ENSP00000394413.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS64710 | O43933 Q96S69 Q96S70 | NM_001282677.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000438045.1 | PEX1-002 | 3329 | 961aa | ENSP00000410438.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PE75 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000541751.1 | PEX1-201 | 1411 | 160aa | ENSP00000438637.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DEY5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000422866.1 | PEX1-010 | 734 | 196aa | ENSP00000389594.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000496420.1 | PEX1-005 | 5333 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484913.1 | PEX1-003 | 4051 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000477342.1 | PEX1-008 | 754 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469417.1 | PEX1-007 | 585 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476923.1 | PEX1-009 | 427 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496092.1 | PEX1-006 | 336 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
