Description
laminin, alpha 4 [Source:HGNC Symbol;Acc:6484]
Gene Synonyms
CMD1JJ, LAMA3, LAMA4*-1
Location
Chromosome 6: 112,429,963-112,576,141 reverse strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 22 transcripts (splice variants), 1 gene allele, 11 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000230538.7 | LAMA4-001 | 6547 | 1823aa | ENSP00000230538.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43491 | E5RFD7 E5RFQ2 E5RHF3 E5RK79 Q16363 | NM_001105206.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000522006.1 | LAMA4-008 | 6438 | 1816aa | ENSP00000429488.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34514 | E5RFD7 E5RHF3 E5RK79 Q16363 | NM_002290.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000389463.4 | LAMA4-009 | 6297 | 1816aa | ENSP00000374114.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34514 | E5RFD7 E5RHF3 E5RK79 Q16363 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000424408.2 | LAMA4-012 | 5983 | 1816aa | ENSP00000416470.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34514 | E5RFD7 E5RHF3 E5RK79 Q16363 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000521398.1 | LAMA4-011 | 1330 | 331aa | ENSP00000430336.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD7 E5RFQ2 E5RHF3 E5RK79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000431543.2 | LAMA4-002 | 1080 | 129aa | ENSP00000412136.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD7 E5RK79 Q6LET9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000368638.4 | LAMA4-005 | 1061 | 120aa | ENSP00000357627.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43492 | Q16363 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000521732.1 | LAMA4-007 | 729 | 187aa | ENSP00000427865.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000368640.4 | LAMA4-003 | 672 | 178aa | ENSP00000357629.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000453937.2 | LAMA4-010 | 645 | 120aa | ENSP00000398226.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43492 | Q16363 | NM_001105209.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000519932.1 | LAMA4-015 | 588 | 106aa | ENSP00000428583.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD7 E5RHF3 E5RK79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000455073.1 | LAMA4-006 | 554 | 120aa | ENSP00000408604.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q16363 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000243219.3 | LAMA4-016 | 541 | 87aa | ENSP00000243219.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD7 E5RK79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521690.1 | LAMA4-014 | 539 | 81aa | ENSP00000430415.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RK79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523765.1 | LAMA4-019 | 1054 | 188aa | ENSP00000427837.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000524032.1 | LAMA4-017 | 559 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000423735.2 | LAMA4-004 | 331 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000521187.1 | LAMA4-013 | 2725 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000604740.1 | LAMA4-022 | 694 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000519245.1 | LAMA4-020 | 587 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000521693.1 | LAMA4-021 | 579 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000518842.1 | LAMA4-018 | 480 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
