Description
RAD51 paralog C [Source:HGNC Symbol;Acc:9820]
Gene Synonyms
BROVCA3, FANCO, R51H3, RAD51L2
Location
Chromosome 17: 56,769,934-56,811,703 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 17 transcripts (splice variants), 2 paralogues and is associated with 8 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000337432.4 | RAD51C-001 | 1322 | 376aa | ENSP00000336701.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11611 | J3QR58 O43502 Q7KZJ0 | NM_058216.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000583539.1 | RAD51C-018 | 1319 | 346aa | ENSP00000463121.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E0G0 J3QKK3 J3QR58 Q7KZJ0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000413590.1 | RAD51C-011 | 779 | 257aa | ENSP00000401741.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000461271.1 | RAD51C-008 | 726 | 135aa | ENSP00000464056.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QR58 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000425173.1 | RAD51C-006 | 639 | 213aa | ENSP00000407282.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C2Q5 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000421782.2 | RAD51C-013 | 565 | 135aa | ENSP00000391450.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45745 | O43502 Q7KZJ0 | NM_002876.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000584804.1 | RAD51C-016 | 474 | 107aa | ENSP00000463658.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLQ2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000475762.1 | RAD51C-002 | 2077 | 52aa | ENSP00000432421.1 | Nonsense mediated decay | E9PI66 | - | - | |
| ENST00000486827.1 | RAD51C-004 | 1609 | 52aa | ENSP00000436761.1 | Nonsense mediated decay | E9PI66 | - | - | |
| ENST00000487525.1 | RAD51C-007 | 1253 | 134aa | ENSP00000431637.1 | Nonsense mediated decay | Q7KZJ0 | - | - | |
| ENST00000482007.1 | RAD51C-003 | 1098 | 134aa | ENSP00000433332.1 | Nonsense mediated decay | Q7KZJ0 | - | - | |
| ENST00000584617.1 | RAD51C-014 | 723 | 47aa | ENSP00000463473.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000487921.1 | RAD51C-009 | 653 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476741.1 | RAD51C-005 | 558 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000581221.1 | RAD51C-015 | 751 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578151.1 | RAD51C-017 | 464 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461706.1 | RAD51C-012 | 427 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
