Description
ligase I, DNA, ATP-dependent [Source:HGNC Symbol;Acc:6598]
Location
Chromosome 19: 48,618,702-48,673,860 reverse strand.
GRCh37:CM000681.1
About this gene
This gene has 20 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000263274.7 | LIG1-001 | 3384 | 919aa | ENSP00000263274.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12711 | M0QY71 M0R1S4 P18858 Q76GR4 | NM_000234.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000427526.2 | LIG1-002 | 3027 | 888aa | ENSP00000442841.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DTU4 Q76GR4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536218.1 | LIG1-201 | 2886 | 851aa | ENSP00000441531.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ28 M0R1G7 M0R1S4 Q76GR4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000596549.1 | LIG1-014 | 580 | 149aa | ENSP00000471861.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0R1G7 M0R1S4 Q76GR4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000593425.1 | LIG1-009 | 575 | 145aa | ENSP00000469638.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QY71 M0R1S4 Q76GR4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000598938.1 | LIG1-008 | 377 | 28aa | ENSP00000472085.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0R1S4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000594759.1 | LIG1-004 | 4102 | 800aa | ENSP00000471380.1 | Nonsense mediated decay | M0QY71 M0R0Q7 M0R1S4 Q59HG7 Q76GR4 | - | - | |
| ENST00000601091.1 | LIG1-006 | 3957 | 801aa | ENSP00000471836.1 | Nonsense mediated decay | M0QY71 M0R1S4 Q2TB12 Q76GR4 | - | - | |
| ENST00000542460.1 | LIG1-005 | 1527 | 415aa | ENSP00000445928.1 | Nonsense mediated decay | B4E135 M0R1S4 Q76GR4 | - | - | |
| ENST00000596672.1 | LIG1-015 | 792 | 36aa | ENSP00000472331.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000599165.1 | LIG1-011 | 570 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000596104.1 | LIG1-012 | 531 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000594067.1 | LIG1-007 | 2697 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000596457.1 | LIG1-017 | 792 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000599322.1 | LIG1-019 | 620 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000595758.1 | LIG1-013 | 606 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000600055.1 | LIG1-010 | 602 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000597146.1 | LIG1-020 | 589 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000596332.1 | LIG1-018 | 584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000597901.1 | LIG1-016 | 565 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
