Description
RPGRIP1-like [Source:HGNC Symbol;Acc:29168]
Gene Synonyms
CORS3, FTM, JBTS7, KIAA1005, MKS5, NPHP8
Location
Chromosome 16: 53,631,595-53,737,850 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 11 transcripts (splice variants), 1 paralogue and is associated with 8 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000379925.3 | RPGRIP1L-009 | 5297 | 1315aa | ENSP00000369257.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32447 | H3BPF5 I3L2P2 J3QLR9 Q68CZ1 | NM_015272.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000262135.4 | RPGRIP1L-003 | 8195 | 1235aa | ENSP00000262135.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45486 | H3BPF5 I3L2P2 J3QLR9 Q68CZ1 | NM_001127897.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000563746.1 | RPGRIP1L-007 | 4193 | 1281aa | ENSP00000457889.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPF5 H3BV03 I3L2P2 J3QLR9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000564374.1 | RPGRIP1L-001 | 3877 | 1253aa | ENSP00000456534.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPF5 H3BS47 I3L2P2 J3QLR9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000568653.3 | RPGRIP1L-002 | 2429 | 125aa | ENSP00000455451.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPS4 J3QLR9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000562230.1 | RPGRIP1L-005 | 1107 | 354aa | ENSP00000455295.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPF5 I3L2P2 J3QLR9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000566096.1 | RPGRIP1L-010 | 893 | 78aa | ENSP00000458705.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1B5 J3QLR9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000562588.1 | RPGRIP1L-008 | 651 | 122aa | ENSP00000459817.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L2P2 J3QLR9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000569716.1 | RPGRIP1L-006 | 465 | 56aa | ENSP00000463678.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLR9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000568009.1 | RPGRIP1L-013 | 482 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000565343.1 | RPGRIP1L-012 | 1611 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |