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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KATNAL1 ENSG00000102781

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Description

katanin p60 subunit A-like 1 [Source:HGNC Symbol;Acc:28361]

Gene Synonyms

MGC2599

Location

Chromosome 13: 30,776,767-30,881,621 reverse strand.

GRCh37:CM000675.1

About this gene

This gene has 5 transcripts (splice variants) and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380615.3	KATNAL1-001	7551	490aa	ENSP00000369989.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31956	A2A3H2 Q5T558 Q9BW62	NM_032116.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380617.3	KATNAL1-002	1634	490aa	ENSP00000369991.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31956	A2A3H2 Q5T558 Q9BW62	NM_001014380.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441394.1	KATNAL1-003	797	150aa	ENSP00000407792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T558	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414289.1	KATNAL1-004	566	153aa	ENSP00000397776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3H2 Q5T558	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480854.1	KATNAL1-005	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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