Description
lysine (K)-specific demethylase 2B [Source:HGNC Symbol;Acc:13610]
Gene Synonyms
CXXC2, FBL10, FBXL10, Fbl10, JHDM1B, PCCX2
Location
Chromosome 12: 121,866,900-122,018,920 reverse strand.
GRCh37:CM000674.1
View alleles of this gene on alternative sequences
About this gene
This gene has 18 transcripts (splice variants), 1 gene allele, 5 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000377071.4 | KDM2B-001 | 4595 | 1336aa | ENSP00000366271.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41850 | F5GXC2 F5H4A7 F5H6N6 F5H7T7 Q8NHM5 | NM_032590.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000377069.4 | KDM2B-005 | 5224 | 1265aa | ENSP00000366269.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41849 | F5GXC2 F5H4A7 F5H6N6 F5H7T7 Q8NHM5 | NM_001005366.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542973.1 | KDM2B-022 | 3170 | 704aa | ENSP00000437821.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8NHM5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000536437.1 | KDM2B-201 | 2522 | 559aa | ENSP00000445196.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXC2 F5H4A7 F5H6N6 F5H7T7 Q1RLM7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000538046.2 | KDM2B-004 | 2301 | 507aa | ENSP00000474307.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R3G4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000446152.2 | KDM2B-006 | 1549 | 510aa | ENSP00000398279.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXC2 F5H4A7 F5H6N6 F5H7T7 F8WBN2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543852.1 | KDM2B-011 | 1188 | 123aa | ENSP00000440942.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXW2 F5H7T7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000539394.1 | KDM2B-007 | 892 | 180aa | ENSP00000440373.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXC2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541318.1 | KDM2B-014 | 600 | 41aa | ENSP00000443052.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5W7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538379.1 | KDM2B-015 | 574 | 171aa | ENSP00000445102.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4A7 F5H6N6 F5H7T7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545022.1 | KDM2B-016 | 544 | 154aa | ENSP00000437497.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6N6 F5H7T7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541511.1 | KDM2B-012 | 528 | 97aa | ENSP00000442293.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7T7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542030.1 | KDM2B-017 | 460 | 125aa | ENSP00000444846.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4X4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543025.1 | KDM2B-002 | 2522 | 104aa | ENSP00000438138.1 | Nonsense mediated decay | F5H0A1 | - | - | |
| ENST00000538503.1 | KDM2B-020 | 6676 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000538243.1 | KDM2B-013 | 4110 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540191.1 | KDM2B-008 | 574 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000536036.1 | KDM2B-023 | 500 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
