Description
regulatory factor X, 3 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9984]
Location
Chromosome 9: 3,218,297-3,526,004 reverse strand.
GRCh37:CM000671.1
About this gene
This gene has 11 transcripts (splice variants) and 5 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000382004.3 | RFX3-006 | 9307 | 749aa | ENSP00000371434.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6449 | F6USP3 F6XM74 P48380 | NM_134428.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000302303.1 | RFX3-201 | 3275 | 707aa | ENSP00000303847.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6450 | F6USP3 F6XM74 P48380 | NM_002919.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000358730.2 | RFX3-005 | 2971 | 707aa | ENSP00000351574.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6450 | F6USP3 F6XM74 P48380 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000449190.1 | RFX3-004 | 869 | 138aa | ENSP00000399352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6XM74 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000457373.1 | RFX3-003 | 822 | 216aa | ENSP00000405664.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6UGA0 F6XM74 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000458034.1 | RFX3-008 | 814 | 174aa | ENSP00000400026.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6USP3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000451859.1 | RFX3-002 | 740 | 184aa | ENSP00000411756.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6UV76 F6XM74 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449234.1 | RFX3-007 | 633 | 124aa | ENSP00000415594.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y7W5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000442560.1 | RFX3-009 | 526 | 135aa | ENSP00000410988.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y790 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000420720.1 | RFX3-010 | 492 | 156aa | ENSP00000416189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y7Z4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000381984.2 | RFX3-001 | 364 | 85aa | ENSP00000371414.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9Z1Z2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
