Description
ATPase, H+ transporting, lysosomal V0 subunit a1 [Source:HGNC Symbol;Acc:865]
Gene Synonyms
ATP6N1, ATP6N1A, Stv1, VPP1, Vph1, a1
Location
Chromosome 17: 40,610,862-40,674,629 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 26 transcripts (splice variants), 3 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000264649.6 | ATP6V0A1-004 | 4110 | 838aa | ENSP00000264649.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45683 | K7ELZ6 K7EM24 Q93050 | NM_005177.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000343619.4 | ATP6V0A1-006 | 4128 | 837aa | ENSP00000342951.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45684 | B7Z2J9 F5H1T6 K7ELZ6 K7EM24 Q93050 | NM_001130021.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544137.1 | ATP6V0A1-201 | 3047 | 483aa | ENSP00000446377.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H1T6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000546249.1 | ATP6V0A1-202 | 3046 | 837aa | ENSP00000444676.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H569 K7ELZ6 K7EM24 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000393829.2 | ATP6V0A1-001 | 3028 | 831aa | ENSP00000377415.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11426 | K7ELZ6 K7EM24 Q93050 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537728.1 | ATP6V0A1-003 | 2774 | 788aa | ENSP00000443991.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z641 K7ELZ6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000585525.1 | ATP6V0A1-005 | 2679 | 794aa | ENSP00000466878.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z2A9 B7Z2J9 F5H1T6 K7ELZ6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000586201.1 | ATP6V0A1-025 | 881 | 188aa | ENSP00000468177.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ERA6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000589727.1 | ATP6V0A1-014 | 664 | 198aa | ENSP00000467373.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EPG4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592324.1 | ATP6V0A1-017 | 585 | 195aa | ENSP00000466767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EN36 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000589213.1 | ATP6V0A1-013 | 580 | 93aa | ENSP00000466290.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELZ6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000588138.1 | ATP6V0A1-022 | 573 | 191aa | ENSP00000466852.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENA1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000587824.1 | ATP6V0A1-012 | 554 | 130aa | ENSP00000466328.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELZ6 K7EM24 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000588901.1 | ATP6V0A1-015 | 589 | 68aa | ENSP00000468001.1 | Nonsense mediated decay | K7EQW2 | - | - | |
| ENST00000587510.1 | ATP6V0A1-023 | 564 | 129aa | ENSP00000468169.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000587797.1 | ATP6V0A1-010 | 1878 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000587299.1 | ATP6V0A1-027 | 1000 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000589759.1 | ATP6V0A1-020 | 502 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000592831.1 | ATP6V0A1-009 | 4652 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000585828.1 | ATP6V0A1-007 | 2139 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000588629.1 | ATP6V0A1-002 | 1797 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000588806.1 | ATP6V0A1-024 | 842 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587882.1 | ATP6V0A1-019 | 780 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586001.1 | ATP6V0A1-016 | 587 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587375.1 | ATP6V0A1-018 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586315.1 | ATP6V0A1-021 | 357 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
