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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXA11 ENSG00000005073

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Description

homeobox A11 [Source:HGNC Symbol;Acc:5101]

Gene Synonyms

HOX1, HOX1I

Location

Chromosome 7: 27,221,129-27,224,842 reverse strand.

GRCh37:CM000669.1

About this gene

This gene has 2 transcripts (splice variants), 16 paralogues and is associated with 36 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000006015.3	HOXA11-001	2295	313aa	ENSP00000006015.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5411	P31270	NM_005523.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517402.1	HOXA11-002	2137	283aa	ENSP00000448962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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